生信分析 数据检索
UCSC Genome Browser
著名的基因组浏览器
标签:bioinformatics Blat chicken genome chimp genome ciona comparative genomics danio rerio genome dog genome drosophila EST frog genome fruitfly genome fugu gene prediction genome genome assembly genome browser hapMap human genome human variation mouse genome mRNA opossum rat genome rhesus SNP SNPs UCSC xenopus yeast zebrafish genomeUCSC基因组浏览器是由来自和英国的多机构研究团队University of California Santa Cruz(UCSC)基因组学研究所的跨部门团队Genome Bioinformatics Group开发和维护。最早的基因组浏览器,主要是为人类基因组设计的。现在已发展为包括大量的脊椎动物和模型生物的装配体和注释信息,以及用于查看、分析和下载数据的大量工具。
UCSC是目前生物领域里常用的数据库之一,可以快速而且可靠地显示任何规模的基因组的任何所需部分,以及包含数十种对齐的注释轨迹(已知基因,预测基因,EST,mRNA,CpG岛,染色体条带,物种同源性等)。用户也可以出于教育或科研目的将他们自己的注释信息添加到浏览器中。大多数人在使用CSC基因组浏览器的目的是,访问数据库中的原始信息,根据基因组的位置、ID 等信息进行浏览,提供了 80 多个物种的基因组信息,可视化内容齐全,根据需要加入注释信息。
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